PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.X784U
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 413aa    MW: 45101.1 Da    PI: 8.154
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.X784UgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.62.5e-09294341455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Araip.X784U 294 SHSLAERVRREKISERMKLLQDLVPGC----NKVTGKALMLDEIINYVQSLQ 341
                  8*************************9....677*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.45E-9288343No hitNo description
SuperFamilySSF474599.03E-15288348IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.5E-15290348IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.663290340IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.9E-6294341IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.6E-8296346IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    Send to blast
MEIHQQNNVA NCSPENNNHQ NQDSFYNNNN TDHNNLQFDS SALSSMVSSP STAAPNFNMI  60
QNDNSFVIRE LIGKLGTIGG SSAEISPHSQ TVALYNNNNT TPSSSCYSTP LNSPPKLNMP  120
KPPPPSSSMA LNSATVAEFS ADPGFAERAA KFSCFGSRSF NGRTTTTTTT TTTSPLVMIN  180
NHNNNNGAEL THQRSNPIHR VSSSPSLKSL GSQMEKICSS PLEMAANSSQ EESTISEQNP  240
NVEGAALKIA SSSDMSSRKR KGSSRAKAKD STKPPEPPKD YIHVRARRGQ ATDSHSLAER  300
VRREKISERM KLLQDLVPGC NKVTGKALML DEIINYVQSL QRQFLSMKLA SVNTRMDLSI  360
ENIVPKDYPL TFCEDDLHTI VQMGFGQTSN RTTPIHSPSF DGSNQVSQMK VEL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016175918.10.0PREDICTED: transcription factor bHLH78
SwissprotQ9SRT29e-84BH062_ARATH; Transcription factor bHLH62
TrEMBLV4TFT21e-122V4TFT2_9R
STRINGGLYMA16G10620.11e-111(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF25303480
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07340.11e-63bHLH family protein